Slot: molecular_formula

_The molecular formula of a molecule_

URI: https://CCPBioSim.ac.uk/biosim-schema/molecular_formula

Applicable Classes

Name

Description

Modifies Slot

MoleculeID

Identifiers of a molecule type in the simulated system

no

Properties

Type and Range

Property

Value

Range

string

Domain Of

MoleculeID

Cardinality and Requirements

Property

Value

Value Constraints

Property

Value

Regex Pattern

^([A-Z][a-z]?\d*)+$

Examples

Value

C8H10N4O2

Identifier and Mapping Information

Annotations

property

value

engine_mapping

[{‘engine’: ‘toptrajparser’, ‘key’: ‘molecular_formula’}]

Schema Source

  • from schema: https://CCPBioSim.ac.uk/biosim-schema/

Mappings

Mapping Type

Mapped Value

self

https://CCPBioSim.ac.uk/biosim-schema/molecular_formula

native

https://CCPBioSim.ac.uk/biosim-schema/molecular_formula

LinkML Source

name: molecular_formula
annotations:
  engine_mapping:
    tag: engine_mapping
    value:
    - engine: toptrajparser
      key: molecular_formula
description: The molecular formula of a molecule\
examples:
- value: C8H10N4O2
from_schema: https://CCPBioSim.ac.uk/biosim-schema/
rank: 1000
domain_of:
- MoleculeID
range: string
pattern: ^([A-Z][a-z]?\d*)+$