Slot: average_potential_energy

Average potential energy sampled from the simulation, given as a float.

URI: https://CCPBioSim.ac.uk/biosim-schema/average_potential_energy

Applicable Classes

Name

Description

Modifies Slot

SimulationAverages

Average values of observables outputted from the simulation

no

Properties

Type and Range

Property

Value

Range

MolarEnergyQuantity

Domain Of

SimulationAverages

Cardinality and Requirements

Property

Value

Identifier and Mapping Information

Annotations

property

value

engine_mapping

[{‘engine’: ‘gromacs’, ‘key’: ‘Potential’, ‘unit’: ‘kJ/mol’}, {‘engine’: ‘amber’, ‘key’: ‘EPtot’, ‘unit’: ‘kcal/mol’}]

Schema Source

  • from schema: https://CCPBioSim.ac.uk/biosim-schema/

Mappings

Mapping Type

Mapped Value

self

https://CCPBioSim.ac.uk/biosim-schema/average_potential_energy

native

https://CCPBioSim.ac.uk/biosim-schema/average_potential_energy

LinkML Source

name: average_potential_energy
annotations:
  engine_mapping:
    tag: engine_mapping
    value:
    - engine: gromacs
      key: Potential
      unit: kJ/mol
    - engine: amber
      key: EPtot
      unit: kcal/mol
description: Average potential energy sampled from the simulation, given as a float.
from_schema: https://CCPBioSim.ac.uk/biosim-schema/
rank: 1000
domain_of:
- SimulationAverages
range: MolarEnergyQuantity