Slot: PDB_ID¶

Protein Data Bank identifier

URI: https://CCPBioSim.ac.uk/biosim-schema/PDB_ID

Inheritance¶

identifier
- PDB_ID

Applicable Classes¶

Name	Description	Modifies Slot
MoleculeID	Identifiers of a molecule type in the simulated system	no

Properties¶

Type and Range¶

Property	Value
Range	string
Domain Of	MoleculeID

Cardinality and Requirements¶

Property	Value

Value Constraints¶

Property	Value
Regex Pattern	`^[0-9A-Za-z]{4}$`

Aliases¶

PDB ID

Examples¶

Value
2VB1

Identifier and Mapping Information¶

Annotations¶

property	value
database	PDB
prefix	pdb
base_uri	https://identifiers.org/pdb:

Schema Source¶

from schema: https://CCPBioSim.ac.uk/biosim-schema/

Mappings¶

Mapping Type	Mapped Value
self	https://CCPBioSim.ac.uk/biosim-schema/PDB_ID
native	https://CCPBioSim.ac.uk/biosim-schema/PDB_ID

LinkML Source¶

name: PDB_ID
annotations:
  database:
    tag: database
    value: PDB
  prefix:
    tag: prefix
    value: pdb
  base_uri:
    tag: base_uri
    value: 'https://identifiers.org/pdb:'
description: Protein Data Bank identifier
examples:
- value: 2VB1
from_schema: https://CCPBioSim.ac.uk/biosim-schema/
aliases:
- PDB ID
rank: 1000
is_a: identifier
domain_of:
- MoleculeID
range: string
pattern: ^[0-9A-Za-z]{4}$