Class: SimulationStages¶

Stages of simulation workflow.

URI: https://CCPBioSim.ac.uk/biosim-schema/SimulationStages

         classDiagram
    class SimulationStages
    click SimulationStages href "../../classes/SimulationStages/"
      SimulationStages : analysis
        
          
    
        
        
        SimulationStages --> "0..1" Analysis : analysis
        click Analysis href "../../classes/Analysis/"
    

        
      SimulationStages : equilibration
        
          
    
        
        
        SimulationStages --> "0..1" Equilibration : equilibration
        click Equilibration href "../../classes/Equilibration/"
    

        
      SimulationStages : minimisation
        
          
    
        
        
        SimulationStages --> "0..1" Minimisation : minimisation
        click Minimisation href "../../classes/Minimisation/"
    

        
      SimulationStages : production
        
          
    
        
        
        SimulationStages --> "0..1" Production : production
        click Production href "../../classes/Production/"
    

        
      SimulationStages : setup
        
          
    
        
        
        SimulationStages --> "0..1" Setup : setup
        click Setup href "../../classes/Setup/"

Slots¶

Name	Cardinality and Range	Description	Inheritance
setup	0..1 Setup	Setup stage of a simulation	direct
minimisation	0..1 Minimisation	Minimisation stage of a simulation	direct
equilibration	0..1 Equilibration	Equilibration stage of a simulation	direct
production	0..1 Production	Production stage of a simulation	direct
analysis	0..1 Analysis	Analysis stage of a simulation	direct

Usages¶

used by	used in	type	used
SimulationMetadata	stages	range	SimulationStages

Identifier and Mapping Information¶

Schema Source¶

from schema: https://CCPBioSim.ac.uk/biosim-schema/

Mappings¶

Mapping Type	Mapped Value
self	https://CCPBioSim.ac.uk/biosim-schema/SimulationStages
native	https://CCPBioSim.ac.uk/biosim-schema/SimulationStages

LinkML Source¶

Direct¶

name: SimulationStages
description: Stages of simulation workflow.
from_schema: https://CCPBioSim.ac.uk/biosim-schema/
slots:
- setup
- minimisation
- equilibration
- production
- analysis

Induced¶

name: SimulationStages
description: Stages of simulation workflow.
from_schema: https://CCPBioSim.ac.uk/biosim-schema/
attributes:
  setup:
    name: setup
    description: Setup stage of a simulation.
    from_schema: https://CCPBioSim.ac.uk/biosim-schema/
    rank: 1000
    owner: SimulationStages
    domain_of:
    - SimulationStages
    range: Setup
  minimisation:
    name: minimisation
    description: Minimisation stage of a simulation.
    from_schema: https://CCPBioSim.ac.uk/biosim-schema/
    rank: 1000
    owner: SimulationStages
    domain_of:
    - SimulationStages
    range: Minimisation
  equilibration:
    name: equilibration
    description: Equilibration stage of a simulation.
    from_schema: https://CCPBioSim.ac.uk/biosim-schema/
    rank: 1000
    owner: SimulationStages
    domain_of:
    - SimulationStages
    range: Equilibration
  production:
    name: production
    description: Production stage of a simulation.
    from_schema: https://CCPBioSim.ac.uk/biosim-schema/
    rank: 1000
    owner: SimulationStages
    domain_of:
    - SimulationStages
    range: Production
  analysis:
    name: analysis
    description: Analysis stage of a simulation.
    from_schema: https://CCPBioSim.ac.uk/biosim-schema/
    rank: 1000
    owner: SimulationStages
    domain_of:
    - SimulationStages
    range: Analysis