Slot: nucleic_sequence¶
One letter sequence for nucleic acid nucleotides.
URI: https://CCPBioSim.ac.uk/biosim-schema/nucleic_sequence
Applicable Classes¶
Name |
Description |
Modifies Slot |
|---|---|---|
Identifiers of a molecule type in the simulated system |
no |
Properties¶
Type and Range¶
Property |
Value |
|---|---|
Range |
|
Domain Of |
Cardinality and Requirements¶
Property |
Value |
|---|
Value Constraints¶
Property |
Value |
|---|---|
Regex Pattern |
|
Examples¶
Value |
|---|
ATGCATCGATCGATCGATCG |
Identifier and Mapping Information¶
Annotations¶
property |
value |
|---|---|
textarea |
True |
engine_mapping |
[{‘engine’: ‘toptrajparser’, ‘key’: ‘nucleic_sequence’}] |
Schema Source¶
from schema: https://CCPBioSim.ac.uk/biosim-schema/
Mappings¶
Mapping Type |
Mapped Value |
|---|---|
self |
https://CCPBioSim.ac.uk/biosim-schema/nucleic_sequence |
native |
https://CCPBioSim.ac.uk/biosim-schema/nucleic_sequence |
LinkML Source¶
name: nucleic_sequence
annotations:
textarea:
tag: textarea
value: true
engine_mapping:
tag: engine_mapping
value:
- engine: toptrajparser
key: nucleic_sequence
description: One letter sequence for nucleic acid nucleotides.
examples:
- value: ATGCATCGATCGATCGATCG
from_schema: https://CCPBioSim.ac.uk/biosim-schema/
rank: 1000
domain_of:
- MoleculeID
range: string
pattern: ^[ACGTURYSWKMBDHVN]+$