--- search: boost: 2.0 --- # Enum: NucleicPotentialName _Force fields used to parametrize nucleic acids in a simulation._
URI: [https://CCPBioSim.ac.uk/biosim-schema/NucleicPotentialName](https://CCPBioSim.ac.uk/biosim-schema/NucleicPotentialName) ## Permissible Values | Value | Meaning | Description | | --- | --- | --- | | ff99-bsc0 | None | Force field for nucliec acids | | ff99OL3 | None | Force field for RNA, where quantum mechanics methods at various levels were e... | | LJbb | None | RNA force field with modified phosphate parameters (from OL force field) and ... | | ROC | None | Force field with alternative set of torsions for RNA, fit to quantum calculat... | | Shaw | None | RNA force field with more extensive modifications | | OL15 | None | Force field for DNA, with a combination of three dihedral updates | | OL21 | None | DNA force field that adds some new torsion modifications, aimed at non-B doub... | | OL24 | None | OL24 is a 2024 DNA force field tested on both canonical and non-canonical DNA | | OL3 | None | The Amber OL3 force field is a parameter set for simulations of RNA | | bsc1 | None | Updated version of bsc0 force field for DNA, using an implicit solvation mode... | | terminal_monophosphate | None | Force field library for the 5\’ end of many DNA and RNA chains have one or mo... | ## Slots | Name | Description | | --- | --- | | [nucleic_potential_name](../slots/nucleic_potential_name.md) | Force field used to describe nucleic acids | ## Identifier and Mapping Information ### Schema Source * from schema: https://CCPBioSim.ac.uk/biosim-schema/ ## LinkML Source ```yaml name: NucleicPotentialName description: Force fields used to parametrize nucleic acids in a simulation. from_schema: https://CCPBioSim.ac.uk/biosim-schema/ rank: 1000 permissible_values: ff99-bsc0: text: ff99-bsc0 description: Force field for nucliec acids. High level quantum mechanics calculations were perfomed on models of sugars and phosphates, specifically a sugar-phosphate model and a sugar-phosphate-sugar model. ff99OL3: text: ff99OL3 description: Force field for RNA, where quantum mechanics methods at various levels were employed to improve the chi angle distribution using relevant model systems. LJbb: text: LJbb description: RNA force field with modified phosphate parameters (from OL force field) and an improved water model (OPC), which has better agreement with NMR data for RNA tetranucleotide populations. ROC: text: ROC description: Force field with alternative set of torsions for RNA, fit to quantum calculations. Shaw: text: Shaw description: RNA force field with more extensive modifications. OL15: text: OL15 description: Force field for DNA, with a combination of three dihedral updates. OL21: text: OL21 description: DNA force field that adds some new torsion modifications, aimed at non-B double helices, as of Amber24, is the current recommended DNA force field. OL24: text: OL24 description: OL24 is a 2024 DNA force field tested on both canonical and non-canonical DNA. OL3: text: OL3 description: The Amber OL3 force field is a parameter set for simulations of RNA. bsc1: text: bsc1 description: Updated version of bsc0 force field for DNA, using an implicit solvation model and a rigorous quantum mechanics methodology. terminal_monophosphate: text: terminal_monophosphate description: Force field library for the 5\’ end of many DNA and RNA chains have one or more phosphate groups. ```